Pseudomonas syringae pv. syringae B728a, Psyr_5017

Gene Feature Overview

Strain	Pseudomonas syringae pv. syringae B728a (Feil et al., 2005) GCF_000012245.1|latest
Locus Tag	Psyr_5017
Name
Replicon	chromosome
Genomic location	5958811 - 5959134 (+ strand)

Cross-References

RefSeq	YP_238082.1
GI	66048241
Entrez	3370575
INSDC	AAY40044.1
NCBI Locus Tag	Psyr_5017
UniParc	UPI0000394E58
UniProtKB Acc	Q4ZLC8
UniProtKB ID	Q4ZLC8_PSEU2
UniRef100	UniRef100_A0A038G5E8
UniRef50	UniRef50_Q8XRA8
UniRef90	UniRef90_A0A038G5E8

Product

Feature Type	CDS
Coding Frame	1
Product Name	NAD(P) transhydrogenase subunit alpha
Synonyms
Evidence for Translation
Charge (pH 7)	4.46
Kyte-Doolittle Hydrophobicity Value	0.816
Molecular Weight (kDa)	11.4
Isoelectric Point (pI)	10.23

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 301 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000194 (527 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Psyr_5017 Search term: NAD(P) transhydrogenase subunit alpha

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000499670 nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863] E-value: 1.7e-13 Percent Identity: 51.8
Ensembl 110, assembly GRCh38.p14	ENSP00000264663 nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863] E-value: 1.7e-13 Percent Identity: 51.8
Ensembl 110, assembly GRCh38.p14	ENSP00000499249 nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863] E-value: 1.7e-13 Percent Identity: 51.8
Ensembl 110, assembly GRCh38.p14	ENSP00000426343 nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863] E-value: 1.7e-13 Percent Identity: 51.8
Ensembl 110, assembly GRCh38.p14	ENSP00000499281 nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863] E-value: 1.7e-13 Percent Identity: 51.8
Ensembl 110, assembly GRCh38.p14	ENSP00000499494 nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863] E-value: 1.7e-13 Percent Identity: 51.8
Ensembl 110, assembly GRCh38.p14	ENSP00000343873 nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863] E-value: 1.7e-13 Percent Identity: 51.8
Ensembl 110, assembly GRCh38.p14	ENSP00000499611 nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863] E-value: 1.7e-13 Percent Identity: 51.8
Ensembl 110, assembly GRCh38.p14	ENSP00000499527 nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863] E-value: 1.7e-13 Percent Identity: 51.8
Ensembl 110, assembly GRCh38.p14	ENSP00000499639 nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863] E-value: 1.7e-13 Percent Identity: 51.8
Ensembl 110, assembly GRCh38.p14	ENSP00000499431 nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863] E-value: 1.7e-13 Percent Identity: 51.8

References