Pseudomonas aeruginosa UCBPP-PA14, PA14_26140

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_26140
Name
Replicon chromosome
Genomic location 2282147 - 2282737 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 28 transposon mutants in orthologs

Cross-References

RefSeq YP_790242.1
GI 116050933
Entrez 4380977
INSDC ABJ12169.1
NCBI Locus Tag PA14_26140
UniParc UPI0000E449EE
UniProtKB Acc Q02P94
UniProtKB ID Q02P94_PSEAB
UniRef100 UniRef100_W0YU87
UniRef50 UniRef50_Q9HZR6
UniRef90 UniRef90_Q9HZR6

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.61
Kyte-Doolittle Hydrophobicity Value -0.201
Molecular Weight (kDa) 21.8
Isoelectric Point (pI) 5.89

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6NSN TRANSCRIPTION/DNA 01/25/19 TetR family transcriptional regulator CifR C99T-C181R Cysteines mutant complexed with 26bp double-strand operator DNA Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT 2.6 X-RAY DIFFRACTION 99.0
6NSM TRANSCRIPTION/DNA 01/25/19 TetR family transcriptional regulator CifR C99T-C107S-C181R Cysteines mutant complexed with 26bp double-strand operator DNA Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT 2.8 X-RAY DIFFRACTION 98.5
6NSR TRANSCRIPTION/DNA 01/25/19 TetR family transcriptional regulator CifR C99T-C181R cysteine mutant complexed with 26bp double-strand operator DNA and apo-CifR C99T-C181R Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT 3 X-RAY DIFFRACTION 99.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 229 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000241 (6008 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_26140

Human Homologs

References

No references are associated with this feature.