Pseudomonas aeruginosa UCBPP-PA14, PA14_28400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_28400
Name
Replicon chromosome
Genomic location 2452624 - 2453901 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_790423.1
GI 116050756
Entrez 4380780
INSDC ABJ11992.1
NCBI Locus Tag PA14_28400
UniParc UPI00000C57ED
UniProtKB Acc Q02NR3
UniProtKB ID Q02NR3_PSEAB
UniRef100 UniRef100_S0IUA0
UniRef50 UniRef50_A0A024HH67
UniRef90 UniRef90_A0A0A8RDW0

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane OprD family porin
Synonyms
Evidence for Translation
Charge (pH 7) -4.83
Kyte-Doolittle Hydrophobicity Value -0.467
Molecular Weight (kDa) 46.9
Isoelectric Point (pI) 5.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 18 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002810 (518 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_28400

Human Homologs

References

No references are associated with this feature.