Pseudomonas aeruginosa UCBPP-PA14, PA14_41575 (sigX)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_41575
Name
sigX
Replicon chromosome
Genomic location 3713608 - 3714198 (- strand)
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_791469.1
GI 116054443
Entrez 4384042
INSDC ABJ15679.1
NCBI Locus Tag PA14_41575
UniParc UPI00000B3BC4
UniProtKB Acc Q02KR7
UniProtKB ID Q02KR7_PSEAB
UniRef100 UniRef100_Q02KR7
UniRef50 UniRef50_Q02KR7
UniRef90 UniRef90_Q02KR7

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor SigX
Synonyms
Evidence for Translation
Charge (pH 7) 1.11
Kyte-Doolittle Hydrophobicity Value -0.758
Molecular Weight (kDa) 23.5
Isoelectric Point (pI) 7.55

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 470 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003619 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_41575
Search term: sigX

Human Homologs

References

No references are associated with this feature.