Pseudomonas aeruginosa UCBPP-PA14, PA14_46420

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_46420
Name
Replicon chromosome
Genomic location 4129186 - 4130019 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 6 transposon mutants in orthologs

Cross-References

RefSeq YP_791859.1
GI 116049338
Entrez 4382323
INSDC ABJ10574.1
NCBI Locus Tag PA14_46420
UniParc UPI00000C5349
UniProtKB Acc Q02JM7
UniProtKB ID Q02JM7_PSEAB
UniRef100 UniRef100_W1MLB1
UniRef50 UniRef50_A9ALU7
UniRef90 UniRef90_W1MLB1

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -1.06
Kyte-Doolittle Hydrophobicity Value -0.079
Molecular Weight (kDa) 29.7
Isoelectric Point (pI) 6.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001308 (593 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_46420

Human Homologs

Ensembl 110, assembly GRCh38.p14
retinol dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:14423]
E-value: 1.5e-26
Percent Identity: 34.6
Ensembl 110, assembly GRCh38.p14
retinol dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:14423]
E-value: 1.5e-26
Percent Identity: 34.6

References

No references are associated with this feature.