Pseudomonas aeruginosa UCBPP-PA14, PA14_52190 (rumA)

Gene Feature Overview

Strain	Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006) GCF_000014625.1|latest
Locus Tag	PA14_52190
Name	rumA
Replicon	chromosome
Genomic location	4628589 - 4629941 (- strand)
Transposon Mutants	3 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs	4 transposon mutants in orthologs

Cross-References

RefSeq	YP_792343.1
GI	116048856
Entrez	4383105
INSDC	ABJ10092.1
NCBI Locus Tag	PA14_52190
UniParc	UPI0000135322
UniProtKB Acc	Q02I93
UniProtKB ID	RLMD_PSEAB
UniRef100	UniRef100_Q02I93
UniRef50	UniRef50_Q4K898
UniRef90	UniRef90_Q02I93

Product

Feature Type	CDS
Coding Frame	1
Product Name	23S rRNA 5-methyluridine methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7)	3.22
Kyte-Doolittle Hydrophobicity Value	-0.150
Molecular Weight (kDa)	49.1
Isoelectric Point (pI)	7.84

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 551 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000899 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA14_52190 Search term: rumA Search term: 23S rRNA 5-methyluridine methyltransferase

Human Homologs

References