Pseudomonas aeruginosa PA7, PSPA7_0163

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_0163
Name
Replicon chromosome
Genomic location 180575 - 182515 (+ strand)

Cross-References

RefSeq YP_001345559.1
GI 152987570
Entrez 5355069
INSDC ABR84753.1
NCBI Locus Tag PSPA7_0163
UniParc UPI0001577096
UniProtKB Acc A6UXM4
UniProtKB ID A6UXM4_PSEA7
UniRef100 UniRef100_A6UXM4
UniRef50 UniRef50_Q9I741
UniRef90 UniRef90_Q9I741

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -8.09
Kyte-Doolittle Hydrophobicity Value -0.523
Molecular Weight (kDa) 72.3
Isoelectric Point (pI) 6.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4UHV STRUCTURAL PROTEIN 03/25/15 The structure of VgrG1, the needle tip of the bacterial Type VI Secretion System PSEUDOMONAS AERUGINOSA 2 X-RAY DIFFRACTION 97.4
4MTK TOXIN 09/19/13 Crystal structure of PA0091 VgrG1, the central spike of the Type VI Secretion System Pseudomonas aeruginosa 3.322 X-RAY DIFFRACTION 97.4
6H3L TOXIN 07/19/18 Structure of VgrG1 in the Type VI secretion pre-firing VgrG1-Tse6-EagT6-EF-Tu-Tsi6 complex Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 4.2 ELECTRON MICROSCOPY 97.4
6H3N TOXIN 07/19/18 Structure of VgrG1 in the Type VI secretion VgrG1-Tse6-EF-Tu complex embedded in lipid nanodiscs Pseudomonas aeruginosa PAO1 3.25 ELECTRON MICROSCOPY 97.4

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 153 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000090 (3342 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_0163

Human Homologs

References

No references are associated with this feature.