Pseudomonas aeruginosa PA7, PSPA7_0558

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_0558
Name
Replicon chromosome
Genomic location 577878 - 579254 (- strand)

Cross-References

RefSeq YP_001345953.1
GI 152986227
Entrez 5355850
INSDC ABR83410.1
NCBI Locus Tag PSPA7_0558
UniParc UPI0000D72D73
UniProtKB Acc A6UYR8
UniProtKB ID A6UYR8_PSEA7
UniRef100 UniRef100_A6UYR8
UniRef50 UniRef50_P21693
UniRef90 UniRef90_Q9I663

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent RNA helicase DbpA
Synonyms
Evidence for Translation
Charge (pH 7) 6.18
Kyte-Doolittle Hydrophobicity Value -0.033
Molecular Weight (kDa) 49.8
Isoelectric Point (pI) 8.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 614 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000446 (550 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_0558

Human Homologs

Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value: 9.4e-62
Percent Identity: 40.1
Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value: 9.4e-62
Percent Identity: 40.1
Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value: 9.4e-62
Percent Identity: 40.1
Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value: 9.4e-62
Percent Identity: 40.1
Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value: 9.4e-62
Percent Identity: 40.1

References

No references are associated with this feature.