Pseudomonas aeruginosa PA7, PSPA7_5248

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_5248
Name
Replicon chromosome
Genomic location 5404422 - 5404799 (+ strand)

Cross-References

RefSeq YP_001350580.1
GI 152984760
Entrez 5358825
INSDC ABR81943.1
NCBI Locus Tag PSPA7_5248
UniParc UPI0000D736C6
UniProtKB Acc A6VBZ5
UniProtKB ID A6VBZ5_PSEA7
UniRef100 UniRef100_A6VBZ5
UniRef50 UniRef50_Q9HVI1
UniRef90 UniRef90_Q9HVI1

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -10.35
Kyte-Doolittle Hydrophobicity Value -0.385
Molecular Weight (kDa) 14.6
Isoelectric Point (pI) 4.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5XLY TRANSFERASE 05/12/17 Crystal structure of CheR1 in complex with c-di-GMP-bound MapZ Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 1.763 X-RAY DIFFRACTION 99.2
1YWU STRUCTURAL GENOMICS, UNKNOWN FUNCTION 02/18/05 Solution NMR structure of Pseudomonas Aeruginosa protein PA4608. Northeast Structural Genomics target PaT7 Pseudomonas aeruginosa NOT SOLUTION NMR 99.2
2L74 c-di-GMP binding protein 12/02/10 Solution structure of the PilZ domain protein PA4608 complex with c-di-GMP identifies charge clustering as molecular readout Pseudomonas aeruginosa NOT SOLUTION NMR 99.2
5Y4R TRANSFERASE/PROTEIN BINDING 08/04/17 Structure of a methyltransferase complex Pseudomonas aeruginosa str. PAO1 2.298 X-RAY DIFFRACTION 99.2

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 39 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004263 (504 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_5248

Human Homologs

References

No references are associated with this feature.