Pseudomonas aeruginosa M18, PAM18_0162 (opdC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa M18
GCF_000226155.1|latest |
| Locus Tag |
PAM18_0162
|
| Name |
opdC
|
| Replicon | chromosome |
| Genomic location | 182996 - 184330 (+ strand) |
Cross-References
| RefSeq | YP_005972753.1 |
| GI | 386056231 |
| Entrez | 12564179 |
| NCBI Locus Tag | PAM18_0162 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
histidine porin OpdC
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -15.39 |
| Kyte-Doolittle Hydrophobicity Value | -0.488 |
| Molecular Weight (kDa) | 48.9 |
| Isoelectric Point (pI) | 4.79 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 3SY9 | MEMBRANE PROTEIN | 07/16/11 | Crystal structure of Pseudomonas aeruginosa OccD2 (OpdC) | Pseudomonas aeruginosa | 2.8 | X-RAY DIFFRACTION | 99.8 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 24 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000160 (436 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PAM18_0162
Search term: opdC
Search term: histidine porin OpdC
|
Human Homologs
References
No references are associated with this feature.