Pseudomonas aeruginosa M18, PAM18_0170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa M18
GCF_000226155.1|latest
Locus Tag
PAM18_0170
Name
Replicon chromosome
Genomic location 192204 - 192584 (- strand)

Cross-References

RefSeq YP_005972761.1
GI 386056239
Entrez 12564187
NCBI Locus Tag PAM18_0170

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -10.07
Kyte-Doolittle Hydrophobicity Value -0.510
Molecular Weight (kDa) 14.5
Isoelectric Point (pI) 4.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6K4F BIOSYNTHETIC PROTEIN 05/23/19 SiaC of Pseudomonas aeruginosa Pseudomonas aeruginosa 1.735 X-RAY DIFFRACTION 99.2
6KKO GENE REGULATION 07/26/19 The crystal structure of SiaB-SiaC complex from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.099 X-RAY DIFFRACTION 99.2
6KKP GENE REGULATION 07/26/19 The crystal structure of apo-SiaC from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.5 X-RAY DIFFRACTION 99.2
7E6G DE NOVO PROTEIN 02/22/21 Crystal structure of diguanylate cyclase SiaD in complex with its activator SiaC from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.65 X-RAY DIFFRACTION 99.2

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 53 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000168 (328 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PAM18_0170

Human Homologs

References

No references are associated with this feature.