Pseudomonas aeruginosa M18, PAM18_0453 (dbpA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa M18
GCF_000226155.1|latest |
| Locus Tag |
PAM18_0453
|
| Name |
dbpA
|
| Replicon | chromosome |
| Genomic location | 505102 - 506478 (- strand) |
Cross-References
| RefSeq | YP_005973044.1 |
| GI | 386056522 |
| Entrez | 12564471 |
| NCBI Locus Tag | PAM18_0453 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ATP-dependent RNA helicase DbpA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 6.18 |
| Kyte-Doolittle Hydrophobicity Value | -0.034 |
| Molecular Weight (kDa) | 49.8 |
| Isoelectric Point (pI) | 8.40 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 617 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000446 (550 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PAM18_0453
Search term: dbpA
Search term: ATP-dependent RNA helicase DbpA
|
Human Homologs
|
Ensembl
107, assembly
GRCh38.p13
|
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value:
8.2e-62
Percent Identity:
40.3
|
|
Ensembl
107, assembly
GRCh38.p13
|
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value:
8.2e-62
Percent Identity:
40.3
|
|
Ensembl
107, assembly
GRCh38.p13
|
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value:
8.2e-62
Percent Identity:
40.3
|
|
Ensembl
107, assembly
GRCh38.p13
|
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value:
8.2e-62
Percent Identity:
40.3
|
References
No references are associated with this feature.