Pseudomonas aeruginosa M18, PAM18_4230 (ampDh3)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa M18
GCF_000226155.1|latest
Locus Tag
PAM18_4230
Name
ampDh3
Replicon chromosome
Genomic location 4670110 - 4670877 (- strand)

Cross-References

RefSeq YP_005976813.1
GI 386060291
Entrez 12568291
NCBI Locus Tag PAM18_4230

Product

Feature Type CDS
Coding Frame 1
Product Name
AmpDh3
Synonyms
Evidence for Translation
Charge (pH 7) -2.57
Kyte-Doolittle Hydrophobicity Value -0.416
Molecular Weight (kDa) 28.7
Isoelectric Point (pI) 6.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4BXJ HYDROLASE 07/12/13 CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA PSEUDOMONAS AERUGINOSA PAO1 2.35 X-RAY DIFFRACTION 99.6
4BXE HYDROLASE/PEPTIDE 07/10/13 CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH ANHYDROMURAMIC PENTAPEPTIDE PSEUDOMONAS AERUGINOSA PAO1; SYNTHETIC CONSTRUCT 2.95 X-RAY DIFFRACTION 99.6
4BXD HYDROLASE/PEPTIDE 07/10/13 CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH TETRASACCHARIDE PENTAPEPTIDE PSEUDOMONAS AERUGINOSA PAO1; SYNTHETIC CONSTRUCT 3.1 X-RAY DIFFRACTION 99.6

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 226 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000780 (358 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PAM18_4230
Search term: ampDh3
Search term: AmpDh3

Human Homologs

References

No references are associated with this feature.