Pseudomonas aeruginosa M18, PAM18_5592

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa M18
GCF_000226155.1|latest
Locus Tag
PAM18_5592
Name
Replicon chromosome
Genomic location 6214405 - 6215544 (- strand)

Cross-References

RefSeq YP_005978171.1
GI 386061649
Entrez 12569691
NCBI Locus Tag PAM18_5592

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.59
Kyte-Doolittle Hydrophobicity Value -0.075
Molecular Weight (kDa) 40.9
Isoelectric Point (pI) 6.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 339 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005013 (316 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PAM18_5592

Human Homologs

Ensembl 97, assembly GRCh38.p12
RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
E-value: 6.2e-27
Percent Identity: 28.9

References

No references are associated with this feature.