Pseudomonas aeruginosa DK2, PADK2_00400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa DK2
GCF_000271365.1|latest
Locus Tag
PADK2_00400
Name
Replicon chromosome
Genomic location 89988 - 90668 (- strand)

Cross-References

RefSeq YP_006480077.1
GI 392981490
Entrez 13171297
NCBI Locus Tag PADK2_00400

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion system protein ImpM
Synonyms
Evidence for Translation
Charge (pH 7) -8.61
Kyte-Doolittle Hydrophobicity Value 0.146
Molecular Weight (kDa) 23.9
Isoelectric Point (pI) 4.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2QNU STRUCTURAL GENOMICS, UNKNOWN FUNCTION 07/19/07 Crystal structure of PA0076 from Pseudomonas aeruginosa PAO1 at 2.05 A resolution PSEUDOMONAS AERUGINOSA PAO1 2.05 X-RAY DIFFRACTION 100.0
6IZ8 SIGNALING PROTEIN 12/18/18 Crystal Structure of TagF from Pseudomonas aeruginosa PSEUDOMONAS AERUGINOSA 2.7 X-RAY DIFFRACTION 99.6

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 49 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000075 (390 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PADK2_00400

Human Homologs

References

No references are associated with this feature.