Pseudomonas aeruginosa DK2, PADK2_00640
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa DK2
GCF_000271365.1|latest |
| Locus Tag |
PADK2_00640
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 142986 - 143213 (- strand) |
Cross-References
| RefSeq | YP_006480125.1 |
| GI | 392981538 |
| Entrez | 13171345 |
| NCBI Locus Tag | PADK2_00640 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.29 |
| Kyte-Doolittle Hydrophobicity Value | -0.467 |
| Molecular Weight (kDa) | 8.6 |
| Isoelectric Point (pI) | 5.58 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 6XRW | TOXIN/ANTITOXIN | 07/13/20 | Chromosomal ParDE TA system from P. aeruginosa | Pseudomonas aeruginosa | 1.77 | X-RAY DIFFRACTION | 98.7 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 25 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000123 (330 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PADK2_00640
Search term: transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.