Pseudomonas aeruginosa DK2, PADK2_01075

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa DK2
GCF_000271365.1|latest
Locus Tag
PADK2_01075
Name
Replicon chromosome
Genomic location 238946 - 239866 (- strand)

Cross-References

RefSeq YP_006480212.1
GI 392981625
Entrez 13171592
NCBI Locus Tag PADK2_01075

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -3.23
Kyte-Doolittle Hydrophobicity Value -0.054
Molecular Weight (kDa) 34.0
Isoelectric Point (pI) 6.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3FZV TRANSCRIPTION REGULATOR 01/26/09 Crystal structure of PA01 protein, putative LysR family transcriptional regulator from Pseudomonas aeruginosa Pseudomonas aeruginosa PA01 2.71 X-RAY DIFFRACTION 100.0
6M5F DNA BINDING PROTEIN 03/10/20 Crystal structure of HinK, a LysR family transcriptional regulator from Pseudomonas aeruginosa Pseudomonas aeruginosa PAO1 2.75 X-RAY DIFFRACTION 99.7

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 535 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000217 (907 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PADK2_01075

Human Homologs

References

No references are associated with this feature.