Pseudomonas aeruginosa DK2, PADK2_02160
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa DK2
GCF_000271365.1|latest |
| Locus Tag |
PADK2_02160
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 471711 - 473630 (- strand) |
Cross-References
| RefSeq | YP_006480427.1 |
| GI | 392981840 |
| Entrez | 13171968 |
| NCBI Locus Tag | PADK2_02160 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ATP-dependent RNA helicase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 29.11 |
| Kyte-Doolittle Hydrophobicity Value | -0.819 |
| Molecular Weight (kDa) | 70.1 |
| Isoelectric Point (pI) | 10.65 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000419 (525 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PADK2_02160
Search term: ATP-dependent RNA helicase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 27 [Source:HGNC Symbol;Acc:HGNC:15837]
E-value:
3.0e-65
Percent Identity:
43.6
|
References
No references are associated with this feature.