Pseudomonas aeruginosa DK2, PADK2_02175
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa DK2
GCF_000271365.1|latest |
| Locus Tag |
PADK2_02175
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 475936 - 476475 (- strand) |
Cross-References
| RefSeq | YP_006480430.1 |
| GI | 392981843 |
| Entrez | 13171971 |
| NCBI Locus Tag | PADK2_02175 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hypothetical protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.85 |
| Kyte-Doolittle Hydrophobicity Value | -0.453 |
| Molecular Weight (kDa) | 20.1 |
| Isoelectric Point (pI) | 7.27 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 6Z3O | HYDROLASE | 05/21/20 | The E74Q mutant of Small Alarmone Hydrolase SAH from Pseudomonas aeruginosa PAO1 | Pseudomonas aeruginosa PAO1 | 1.74 | X-RAY DIFFRACTION | 98.3 |
| 6Z3N | HYDROLASE | 05/21/20 | Apo Structure of a Hydrolase from Pseudomonas aeruginosa PAO1 | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 1.58 | X-RAY DIFFRACTION | 98.9 |
| 6YVC | HYDROLASE | 04/28/20 | Crystal structure of the small alarmone hydrolase (SAH) of Pseudomonas aeruginosa | Pseudomonas aeruginosa | 1.85 | X-RAY DIFFRACTION | 99.4 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 261 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000422 (313 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PADK2_02175
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
HD domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30522]
E-value:
2.3e-07
Percent Identity:
32.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
HD domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30522]
E-value:
2.3e-07
Percent Identity:
32.4
|
References
No references are associated with this feature.