Pseudomonas aeruginosa DK2, PADK2_02560

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa DK2
GCF_000271365.1|latest
Locus Tag
PADK2_02560
Name
Replicon chromosome
Genomic location 563218 - 564699 (- strand)

Cross-References

RefSeq YP_006480507.1
GI 392981920
Entrez 13170966
NCBI Locus Tag PADK2_02560

Product

Feature Type CDS
Coding Frame 1
Product Name
c-type cytochrome
Synonyms
Evidence for Translation
Charge (pH 7) 1.79
Kyte-Doolittle Hydrophobicity Value -0.213
Molecular Weight (kDa) 54.0
Isoelectric Point (pI) 7.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6RTE OXIDOREDUCTASE 05/23/19 Dihydro-heme d1 dehydrogenase NirN in complex with DHE PSEUDOMONAS AERUGINOSA 1.94 X-RAY DIFFRACTION 99.2
6RTD OXIDOREDUCTASE 05/23/19 Dihydro-heme d1 dehydrogenase NirN in complex with DHE PSEUDOMONAS AERUGINOSA 2.36 X-RAY DIFFRACTION 99.2

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 58 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000494 (728 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PADK2_02560
Search term: c-type cytochrome

Human Homologs

References

No references are associated with this feature.