Pseudomonas aeruginosa B136-33, G655_19630

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa B136-33
GCF_000359505.1|latest
Locus Tag
G655_19630
Name
Replicon chromosome
Genomic location 4324772 - 4325311 (- strand)

Cross-References

RefSeq YP_007710765.1
GI 478480114
EC Number 3.5.1.88
Entrez 15136830
NCBI Locus Tag G655_19630

Product

Feature Type CDS
Coding Frame 1
Product Name
peptide deformylase
Synonyms
Evidence for Translation
Charge (pH 7) -10.62
Kyte-Doolittle Hydrophobicity Value -0.263
Molecular Weight (kDa) 20.1
Isoelectric Point (pI) 4.61

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6JFE HYDROLASE 02/08/19 K2U bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.1 X-RAY DIFFRACTION 100.0
6JFF HYDROLASE 02/08/19 K3U bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.1 X-RAY DIFFRACTION 100.0
6JFA HYDROLASE 02/08/19 Met-Ala-Ser bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT 1.93 X-RAY DIFFRACTION 100.0
6JFC HYDROLASE 02/08/19 Actinonin bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.04 X-RAY DIFFRACTION 100.0
6JFN HYDROLASE 02/11/19 K4U bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.04 X-RAY DIFFRACTION 100.0
6JF9 HYDROLASE 02/08/19 Apo crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa Pseudomonas aeruginosa 1.7 X-RAY DIFFRACTION 100.0
6JFD HYDROLASE 02/08/19 K1U bound crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.4 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 586 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001082 (483 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: G655_19630

Human Homologs

References

No references are associated with this feature.