Pseudomonas aeruginosa RP73, M062_03935

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa RP73
GCF_000414035.1|latest
Locus Tag
M062_03935
Name
Replicon chromosome
Genomic location 850344 - 851111 (+ strand)

Cross-References

RefSeq YP_008131244.1
GI 514408349
Entrez 15958530
NCBI Locus Tag M062_03935

Product

Feature Type CDS
Coding Frame 1
Product Name
N-acetylmuramoyl-L-alanine amidase
Synonyms
Evidence for Translation
Charge (pH 7) -2.57
Kyte-Doolittle Hydrophobicity Value -0.424
Molecular Weight (kDa) 28.8
Isoelectric Point (pI) 6.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4BXE HYDROLASE/PEPTIDE 07/10/13 CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH ANHYDROMURAMIC PENTAPEPTIDE PSEUDOMONAS AERUGINOSA PAO1; SYNTHETIC CONSTRUCT 2.95 X-RAY DIFFRACTION 99.6
4BXD HYDROLASE/PEPTIDE 07/10/13 CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH TETRASACCHARIDE PENTAPEPTIDE PSEUDOMONAS AERUGINOSA PAO1; SYNTHETIC CONSTRUCT 3.1 X-RAY DIFFRACTION 99.6
4BXJ HYDROLASE 07/12/13 CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA PSEUDOMONAS AERUGINOSA PAO1 2.35 X-RAY DIFFRACTION 99.6

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 226 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000780 (358 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: M062_03935

Human Homologs

References

No references are associated with this feature.