Pseudomonas aeruginosa RP73, M062_07485
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa RP73
GCF_000414035.1|latest |
| Locus Tag |
M062_07485
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1572973 - 1573806 (- strand) |
Cross-References
| RefSeq | YP_008131942.1 |
| GI | 514412914 |
| Entrez | 15959240 |
| NCBI Locus Tag | M062_07485 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
short-chain dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.06 |
| Kyte-Doolittle Hydrophobicity Value | -0.091 |
| Molecular Weight (kDa) | 29.7 |
| Isoelectric Point (pI) | 6.97 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001308 (593 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: M062_07485
Search term: short-chain dehydrogenase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
retinol dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:14423]
E-value:
3.1e-27
Percent Identity:
34.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
retinol dehydrogenase 8 [Source:HGNC Symbol;Acc:HGNC:14423]
E-value:
3.1e-27
Percent Identity:
34.6
|
References
No references are associated with this feature.