Pseudomonas aeruginosa RP73, M062_09265
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa RP73
GCF_000414035.1|latest |
| Locus Tag |
M062_09265
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1953308 - 1954360 (+ strand) |
Cross-References
| RefSeq | YP_008132295.1 |
| GI | 514409188 |
| Entrez | 15959596 |
| NCBI Locus Tag | M062_09265 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
porin
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -11.67 |
| Kyte-Doolittle Hydrophobicity Value | -0.443 |
| Molecular Weight (kDa) | 37.6 |
| Isoelectric Point (pI) | 4.75 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 4RLC | TRANSPORT PROTEIN | 10/16/14 | Crystal structure of the N-terminal beta-barrel domain of Pseudomonas aeruginosa OprF | Pseudomonas aeruginosa | 1.6 | X-RAY DIFFRACTION | 100.0 |
| 5U1H | PEPTIDE BINDING PROTEIN | 11/28/16 | Crystal structure of the C-terminal peptidoglycan binding domain of OprF (PA1777) from Pseudomonas aeruginosa | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 1.5 | X-RAY DIFFRACTION | 100.0 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 441 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003618 (537 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: M062_09265
Search term: porin
|
Human Homologs
References
No references are associated with this feature.