Pseudomonas entomophila L48, PSEEN0940

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas entomophila L48
GCF_000026105.1|latest
Locus Tag
PSEEN0940
Name
Replicon chromosome
Genomic location 980932 - 982242 (- strand)

Cross-References

RefSeq YP_606660.1
GI 104780162
Entrez 4085538
INSDC CAK13846.1
UniParc UPI0000D781CF
UniProtKB Acc Q1IEQ9
UniProtKB ID Q1IEQ9_PSEE4
UniRef100 UniRef100_Q1IEQ9
UniRef50 UniRef50_V6A7C8
UniRef90 UniRef90_Q1IEQ9

Product

Feature Type CDS
Coding Frame 1
Product Name
OprD family porin
Synonyms
Evidence for Translation
Charge (pH 7) -7.36
Kyte-Doolittle Hydrophobicity Value -0.471
Molecular Weight (kDa) 48399.1
Isoelectric Point (pI) 5.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 23 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000160 (448 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEEN0940
Search term: OprD family porin

Human Homologs

References

No references are associated with this feature.