Pseudomonas stutzeri A1501, PST_0847 (sbcC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas stutzeri A1501
GCF_000013785.1|latest
Locus Tag
PST_0847
Name
sbcC
Replicon chromosome
Genomic location 940043 - 943696 (- strand)

Cross-References

RefSeq YP_001171386.1
GI 146281233
Entrez 5098517
INSDC ABP78544.1
NCBI Locus Tag PST_0847
UniParc UPI00014FF032
UniProtKB Acc A4VHU3
UniProtKB ID A4VHU3_PSEU5
UniRef100 UniRef100_A4VHU3
UniRef50 UniRef50_I6Z818
UniRef90 UniRef90_A4VHU3

Product

Feature Type CDS
Coding Frame 1
Product Name
exonuclease SbcC
Synonyms
Evidence for Translation
Charge (pH 7) -33.56
Kyte-Doolittle Hydrophobicity Value -0.590
Molecular Weight (kDa) 135843.8
Isoelectric Point (pI) 5.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 314 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003885 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PST_0847
Search term: sbcC
Search term: exonuclease SbcC

Human Homologs

References

No references are associated with this feature.