Pseudomonas stutzeri A1501, PST_0848 (sbcD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas stutzeri A1501
GCF_000013785.1|latest
Locus Tag
PST_0848
Name
sbcD
Replicon chromosome
Genomic location 943693 - 945099 (- strand)

Cross-References

RefSeq YP_001171387.1
GI 146281234
Entrez 5098518
NCBI Locus Tag PST_0848

Product

Feature Type CDS
Coding Frame 1
Product Name
exonuclease SbcD
Synonyms
Evidence for Translation
Charge (pH 7) -17.08
Kyte-Doolittle Hydrophobicity Value -0.259
Molecular Weight (kDa) 51591.0
Isoelectric Point (pI) 5.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 301 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003884 (532 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PST_0848
Search term: sbcD
Search term: exonuclease SbcD

Human Homologs

References

No references are associated with this feature.