Pseudomonas stutzeri A1501, PST_0857

Gene Feature Overview

Strain	Pseudomonas stutzeri A1501 GCF_000013785.1|latest
Locus Tag	PST_0857
Name
Replicon	chromosome
Genomic location	951748 - 952632 (+ strand)

Cross-References

RefSeq	YP_001171396.1
GI	146281243
Entrez	5098527
INSDC	ABP78554.1
NCBI Locus Tag	PST_0857
UniParc	UPI00014FF03C
UniProtKB Acc	A4VHV3
UniProtKB ID	A4VHV3_PSEU5
UniRef100	UniRef100_A4VHV3
UniRef50	UniRef50_D8IXT2
UniRef90	UniRef90_A4VHV3

Product

Feature Type	CDS
Coding Frame	1
Product Name	pseudouridylate synthase, 23S RNA-specific
Synonyms
Evidence for Translation
Charge (pH 7)	3.02
Kyte-Doolittle Hydrophobicity Value	-0.463
Molecular Weight (kDa)	34074.8
Isoelectric Point (pI)	7.94

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 552 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003402 (526 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PST_0857 Search term: pseudouridylate synthase, 23S RNA-specific

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000323288 RNA pseudouridine synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180] E-value: 1.1e-17 Percent Identity: 31.0
Ensembl 110, assembly GRCh38.p14	ENSP00000453036 RNA pseudouridine synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180] E-value: 1.1e-17 Percent Identity: 31.0

References