Pseudomonas stutzeri A1501, PST_1636 (nrdB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas stutzeri A1501
GCF_000013785.1|latest
Locus Tag
PST_1636
Name
nrdB
Replicon chromosome
Genomic location 1752789 - 1754036 (- strand)

Cross-References

RefSeq YP_001172163.1
GI 146282010
EC Number 1.17.4.1
Entrez 5097721
INSDC ABP79321.1
NCBI Locus Tag PST_1636
UniParc UPI00014FE829
UniProtKB Acc A4VK20
UniProtKB ID A4VK20_PSEU5
UniRef100 UniRef100_A4VK20
UniRef50 UniRef50_Q9I4I2
UniRef90 UniRef90_Q9I4I2

Product

Feature Type CDS
Coding Frame 1
Product Name
ribonucleotide-diphosphate reductase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) -20.68
Kyte-Doolittle Hydrophobicity Value -0.466
Molecular Weight (kDa) 47.5
Isoelectric Point (pI) 4.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 405 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001114 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PST_1636
Search term: nrdB

Human Homologs

Ensembl 110, assembly GRCh38.p14
ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]
E-value: 3.2e-36
Percent Identity: 28.7
Ensembl 110, assembly GRCh38.p14
ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]
E-value: 3.2e-36
Percent Identity: 28.5
Ensembl 110, assembly GRCh38.p14
ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]
E-value: 3.2e-36
Percent Identity: 28.7
Ensembl 110, assembly GRCh38.p14
ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]
E-value: 3.2e-36
Percent Identity: 28.7

References

No references are associated with this feature.