Pseudomonas stutzeri A1501, PST_1872 (sdhD)

Gene Feature Overview

Strain	Pseudomonas stutzeri A1501 GCF_000013785.1|latest
Locus Tag	PST_1872
Name	sdhD
Replicon	chromosome
Genomic location	2019937 - 2020305 (+ strand)

Cross-References

RefSeq	YP_001172388.1
GI	146282235
Entrez	5097956
INSDC	ABP79546.1
NCBI Locus Tag	PST_1872
UniParc	UPI00014FF3D2
UniProtKB Acc	A4VKP5
UniProtKB ID	A4VKP5_PSEU5
UniRef100	UniRef100_A4VKP5
UniRef50	UniRef50_W6R327
UniRef90	UniRef90_A4VKP5

Product

Feature Type	CDS
Coding Frame	1
Product Name	succinate dehydrogenase (D subunit)
Synonyms
Evidence for Translation
Charge (pH 7)	2.42
Kyte-Doolittle Hydrophobicity Value	0.866
Molecular Weight (kDa)	13.9
Isoelectric Point (pI)	9.08

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 106 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003781 (539 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PST_1872 Search term: sdhD Search term: succinate dehydrogenase (D subunit)

Human Homologs

References