Pseudomonas stutzeri A1501, PST_2016 (lipC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas stutzeri A1501
GCF_000013785.1|latest
Locus Tag
PST_2016
Name
lipC
Replicon chromosome
Genomic location 2189736 - 2190671 (- strand)

Cross-References

RefSeq YP_001172529.1
GI 146282376
Entrez 5098099
INSDC ABP79687.1
NCBI Locus Tag PST_2016
UniParc UPI00014FECD4
UniProtKB Acc A4VL36
UniProtKB ID A4VL36_PSEU5
UniRef100 UniRef100_A4VL36
UniRef50 UniRef50_Q8RKT7
UniRef90 UniRef90_Q8RKT7

Product

Feature Type CDS
Coding Frame 1
Product Name
lipase LipC
Synonyms
Evidence for Translation
Charge (pH 7) -1.18
Kyte-Doolittle Hydrophobicity Value 0.006
Molecular Weight (kDa) 32.6
Isoelectric Point (pI) 6.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 55 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002707 (468 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PST_2016
Search term: lipC
Search term: lipase LipC

Human Homologs

References

No references are associated with this feature.