Pseudomonas stutzeri A1501, PST_2044 (sigX)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas stutzeri A1501
GCF_000013785.1|latest
Locus Tag
PST_2044
Name
sigX
Replicon chromosome
Genomic location 2220704 - 2221312 (+ strand)

Cross-References

RefSeq YP_001172557.1
GI 146282404
Entrez 5098127
INSDC ABP79715.1
NCBI Locus Tag PST_2044
UniParc UPI00014FEDCB
UniProtKB Acc A4VL64
UniProtKB ID A4VL64_PSEU5
UniRef100 UniRef100_A4VL64
UniRef50 UniRef50_A4VL64
UniRef90 UniRef90_A4VL64

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor SigX
Synonyms
Evidence for Translation
Charge (pH 7) 2.11
Kyte-Doolittle Hydrophobicity Value -0.652
Molecular Weight (kDa) 24035.3
Isoelectric Point (pI) 8.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 472 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003619 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PST_2044
Search term: sigX

Human Homologs

References

No references are associated with this feature.