Pseudomonas stutzeri A1501, PST_2616 (holB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas stutzeri A1501
GCF_000013785.1|latest
Locus Tag
PST_2616
Name
holB
Replicon chromosome
Genomic location 2835949 - 2836935 (- strand)

Cross-References

RefSeq YP_001173108.1
GI 146282955
EC Number 2.7.7.7
Entrez 5095578
INSDC ABP80266.1
NCBI Locus Tag PST_2616
UniParc UPI00014FECF4
UniProtKB Acc A4VMR5
UniProtKB ID A4VMR5_PSEU5
UniRef100 UniRef100_A4VMR5
UniRef50 UniRef50_P52024
UniRef90 UniRef90_I4CV91

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA polymerase III subunit delta'
Synonyms
Evidence for Translation
Charge (pH 7) 0.95
Kyte-Doolittle Hydrophobicity Value 0.001
Molecular Weight (kDa) 36.3
Isoelectric Point (pI) 7.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 588 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002621 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PST_2616
Search term: holB

Human Homologs

References

No references are associated with this feature.