Pseudomonas stutzeri A1501, PST_2662

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas stutzeri A1501
GCF_000013785.1|latest
Locus Tag
PST_2662
Name
Replicon chromosome
Genomic location 2883507 - 2885213 (+ strand)

Cross-References

RefSeq YP_001173154.1
GI 146283001
EC Number 6.5.1.1
Entrez 5095624
INSDC ABP80312.1
NCBI Locus Tag PST_2662
UniParc UPI00014FEED7
UniProtKB Acc A4VMW1
UniProtKB ID A4VMW1_PSEU5
UniRef100 UniRef100_A4VMW1
UniRef50 UniRef50_Q13MP2
UniRef90 UniRef90_I4CSJ5

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent DNA ligase
Synonyms
Evidence for Translation
Charge (pH 7) -8.68
Kyte-Doolittle Hydrophobicity Value -0.279
Molecular Weight (kDa) 63678.9
Isoelectric Point (pI) 5.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 248 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015267 (182 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PST_2662

Human Homologs

References

No references are associated with this feature.