Pseudomonas stutzeri A1501, PST_2682 (srmB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas stutzeri A1501
GCF_000013785.1|latest
Locus Tag
PST_2682
Name
srmB
Replicon chromosome
Genomic location 2907285 - 2908652 (- strand)

Cross-References

RefSeq YP_001173174.1
GI 146283021
Entrez 5095644
NCBI Locus Tag PST_2682

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent RNA helicase SrmB
Synonyms
Evidence for Translation
Charge (pH 7) 20.12
Kyte-Doolittle Hydrophobicity Value -0.279
Molecular Weight (kDa) 50267.0
Isoelectric Point (pI) 10.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 647 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002174 (555 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PST_2682
Search term: srmB

Human Homologs

Ensembl 107, assembly GRCh38.p13
DEAD-box helicase 27 [Source:HGNC Symbol;Acc:HGNC:15837]
E-value: 7.3e-63
Percent Identity: 38.3

References

No references are associated with this feature.