Pseudomonas stutzeri A1501, PST_3873
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas stutzeri A1501
GCF_000013785.1|latest |
| Locus Tag |
PST_3873
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4193735 - 4195252 (- strand) |
Cross-References
| RefSeq | YP_001174338.1 |
| GI | 146284185 |
| Entrez | 5096834 |
| NCBI Locus Tag | PST_3873 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
phytoene desaturase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 1.22 |
| Kyte-Doolittle Hydrophobicity Value | -0.221 |
| Molecular Weight (kDa) | 56195.4 |
| Isoelectric Point (pI) | 7.16 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 309 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG016700 (72 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PST_3873
Search term: phytoene desaturase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
retinol saturase [Source:HGNC Symbol;Acc:HGNC:25991]
E-value:
4.8e-10
Percent Identity:
23.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
retinol saturase [Source:HGNC Symbol;Acc:HGNC:25991]
E-value:
4.8e-10
Percent Identity:
23.4
|
References
No references are associated with this feature.