Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_0026

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1
GCF_000219605.1|latest
Locus Tag
PSTAB_0026
Name
Replicon chromosome
Genomic location 27385 - 28707 (- strand)

Cross-References

RefSeq YP_004712396.1
GI 339492103
Entrez 10941069
INSDC AEJ03307.1
NCBI Locus Tag PSTAB_0026
UniParc UPI00014FE65F
UniProtKB Acc F8H391
UniProtKB ID F8H391_PSEUT
UniRef100 UniRef100_A4VFH6
UniRef50 UniRef50_Q4KKR1
UniRef90 UniRef90_A0A098FMZ5

Product

Feature Type CDS
Coding Frame 1
Product Name
ribosomal RNA small subunit methyltransferase B
Synonyms
Evidence for Translation
Charge (pH 7) 3.87
Kyte-Doolittle Hydrophobicity Value -0.159
Molecular Weight (kDa) 48.1
Isoelectric Point (pI) 7.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 581 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000017 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAB_0026

Human Homologs

Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 4.6e-25
Percent Identity: 30.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 4.6e-25
Percent Identity: 30.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 4.6e-25
Percent Identity: 30.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 4.6e-25
Percent Identity: 30.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 4.6e-25
Percent Identity: 30.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 4.6e-25
Percent Identity: 30.8

References

No references are associated with this feature.