Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_1959 (clpP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1
GCF_000219605.1|latest
Locus Tag
PSTAB_1959
Name
clpP
Replicon chromosome
Genomic location 2073441 - 2074079 (+ strand)

Cross-References

RefSeq YP_004714329.1
GI 339494036
Entrez 10943002
INSDC AEJ05240.1
NCBI Locus Tag PSTAB_1959
UniParc UPI000215DC7F
UniProtKB Acc F8HA30
UniProtKB ID F8HA30_PSEUT
UniRef100 UniRef100_F8HA30
UniRef50 UniRef50_Q9I2U1
UniRef90 UniRef90_C1DHF0

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent Clp protease proteolytic subunit
Synonyms
Evidence for Translation
Charge (pH 7) -2.66
Kyte-Doolittle Hydrophobicity Value -0.041
Molecular Weight (kDa) 23.4
Isoelectric Point (pI) 6.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
7M1M HYDROLASE 03/13/21 Crystal structure of Pseudomonas aeruginosa ClpP1 Pseudomonas aeruginosa 2.6 X-RAY DIFFRACTION 91.9

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 582 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003596 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAB_1959
Search term: clpP

Human Homologs

Ensembl 110, assembly GRCh38.p14
caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:HGNC Symbol;Acc:HGNC:2084]
E-value: 3.4e-58
Percent Identity: 55.3

References

No references are associated with this feature.