Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_1960 (clpX)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1
GCF_000219605.1|latest
Locus Tag
PSTAB_1960
Name
clpX
Replicon chromosome
Genomic location 2074177 - 2075457 (+ strand)

Cross-References

RefSeq YP_004714330.1
GI 339494037
Entrez 10943003
INSDC AEJ05241.1
NCBI Locus Tag PSTAB_1960
UniParc UPI000215DC80
UniProtKB Acc F8HA31
UniProtKB ID F8HA31_PSEUT
UniRef100 UniRef100_A4VL79
UniRef50 UniRef50_Q7WK82
UniRef90 UniRef90_Q88KI9

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent protease ATP-binding subunit ClpX
Synonyms
Evidence for Translation
Charge (pH 7) -12.98
Kyte-Doolittle Hydrophobicity Value -0.242
Molecular Weight (kDa) 46.7
Isoelectric Point (pI) 4.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 607 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003595 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAB_1960
Search term: clpX

Human Homologs

Ensembl 110, assembly GRCh38.p14
caseinolytic mitochondrial matrix peptidase chaperone subunit X [Source:HGNC Symbol;Acc:HGNC:2088]
E-value: 2.4e-87
Percent Identity: 44.5

References

No references are associated with this feature.