Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_2173 (serS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1
GCF_000219605.1|latest
Locus Tag
PSTAB_2173
Name
serS
Replicon chromosome
Genomic location 2329032 - 2330312 (- strand)

Cross-References

RefSeq YP_004714543.1
GI 339494250
Entrez 10943216
INSDC AEJ05454.1
NCBI Locus Tag PSTAB_2173
UniParc UPI000215D67A
UniProtKB Acc F8H002
UniProtKB ID F8H002_PSEUT
UniRef100 UniRef100_F8H002
UniRef50 UniRef50_Q6F8G5
UniRef90 UniRef90_A4VLU7

Product

Feature Type CDS
Coding Frame 1
Product Name
seryl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -11.93
Kyte-Doolittle Hydrophobicity Value -0.391
Molecular Weight (kDa) 47574.6
Isoelectric Point (pI) 5.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 651 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002939 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAB_2173
Search term: serS

Human Homologs

Ensembl 110, assembly GRCh38.p14
seryl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:10537]
E-value: 6.0e-54
Percent Identity: 37.2

References

No references are associated with this feature.