Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_2643

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1
GCF_000219605.1|latest
Locus Tag
PSTAB_2643
Name
Replicon chromosome
Genomic location 2838395 - 2840101 (+ strand)

Cross-References

RefSeq YP_004715013.1
GI 339494720
Entrez 10943686
INSDC AEJ05924.1
NCBI Locus Tag PSTAB_2643
UniParc UPI000215DE4F
UniProtKB Acc F8H3X5
UniProtKB ID F8H3X5_PSEUT
UniRef100 UniRef100_F8H3X5
UniRef50 UniRef50_Q13MP2
UniRef90 UniRef90_I4CSJ5

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent DNA ligase
Synonyms
Evidence for Translation
Charge (pH 7) -9.91
Kyte-Doolittle Hydrophobicity Value -0.277
Molecular Weight (kDa) 63750.1
Isoelectric Point (pI) 5.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 250 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015267 (182 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAB_2643

Human Homologs

References

No references are associated with this feature.