Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_2653 (rumA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1
GCF_000219605.1|latest |
| Locus Tag |
PSTAB_2653
|
| Name |
rumA
|
| Replicon | chromosome |
| Genomic location | 2849777 - 2851129 (- strand) |
Cross-References
| RefSeq | YP_004715023.1 |
| GI | 339494730 |
| Entrez | 10945276 |
| INSDC | AEJ05934.1 |
| NCBI Locus Tag | PSTAB_2653 |
| UniParc | UPI000215DED6 |
| UniProtKB Acc | F8H4M5 |
| UniProtKB ID | F8H4M5_PSEUT |
| UniRef100 | UniRef100_F8H4M5 |
| UniRef50 | UniRef50_A4VMW9 |
| UniRef90 | UniRef90_A4VMW9 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
23S rRNA 5-methyluridine methyltransferase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 4.22 |
| Kyte-Doolittle Hydrophobicity Value | -0.229 |
| Molecular Weight (kDa) | 49646.3 |
| Isoelectric Point (pI) | 8.09 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 567 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000899 (553 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSTAB_2653
Search term: rumA
Search term: 23S rRNA 5-methyluridine methyltransferase
|
Human Homologs
References
No references are associated with this feature.