Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_2653 (rumA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1
GCF_000219605.1|latest
Locus Tag
PSTAB_2653
Name
rumA
Replicon chromosome
Genomic location 2849777 - 2851129 (- strand)

Cross-References

RefSeq YP_004715023.1
GI 339494730
Entrez 10945276
INSDC AEJ05934.1
NCBI Locus Tag PSTAB_2653
UniParc UPI000215DED6
UniProtKB Acc F8H4M5
UniProtKB ID F8H4M5_PSEUT
UniRef100 UniRef100_F8H4M5
UniRef50 UniRef50_A4VMW9
UniRef90 UniRef90_A4VMW9

Product

Feature Type CDS
Coding Frame 1
Product Name
23S rRNA 5-methyluridine methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) 4.22
Kyte-Doolittle Hydrophobicity Value -0.229
Molecular Weight (kDa) 49646.3
Isoelectric Point (pI) 8.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 567 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000899 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAB_2653
Search term: rumA

Human Homologs

References

No references are associated with this feature.