Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_2878

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1
GCF_000219605.1|latest
Locus Tag
PSTAB_2878
Name
Replicon chromosome
Genomic location 3075258 - 3076232 (- strand)

Cross-References

RefSeq YP_004715248.1
GI 339494955
Entrez 10943921
INSDC AEJ06159.1
NCBI Locus Tag PSTAB_2878
UniParc UPI00014FE7A7
UniProtKB Acc F8H6M5
UniProtKB ID F8H6M5_PSEUT
UniRef100 UniRef100_A4VNE8
UniRef50 UniRef50_Q92X86
UniRef90 UniRef90_A4VNE8

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) 3.28
Kyte-Doolittle Hydrophobicity Value 0.102
Molecular Weight (kDa) 33.9
Isoelectric Point (pI) 8.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 651 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004463 (467 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAB_2878

Human Homologs

Ensembl 110, assembly GRCh38.p14
3-ketodihydrosphingosine reductase [Source:HGNC Symbol;Acc:HGNC:4021]
E-value: 1.5e-20
Percent Identity: 31.6

References

No references are associated with this feature.