Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_3521 (nosD)

Gene Feature Overview

Strain	Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1 GCF_000219605.1|latest
Locus Tag	PSTAB_3521
Name	nosD
Replicon	chromosome
Genomic location	3785914 - 3787224 (- strand)

Cross-References

RefSeq	YP_004715891.1
GI	339495598
Entrez	10944564
INSDC	AEJ06802.1
NCBI Locus Tag	PSTAB_3521
UniParc	UPI000215D942
UniProtKB Acc	F8H0X3
UniProtKB ID	F8H0X3_PSEUT
UniRef100	UniRef100_F8H0X3
UniRef50	UniRef50_Q9HYL1
UniRef90	UniRef90_P19843

Product

Feature Type	CDS
Coding Frame	1
Product Name	NosD protein
Synonyms
Evidence for Translation
Charge (pH 7)	-8.89
Kyte-Doolittle Hydrophobicity Value	-0.406
Molecular Weight (kDa)	48187.4
Isoelectric Point (pI)	5.27

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
7O12	MEMBRANE PROTEIN	03/28/21	ABC transporter NosDFY, AMPPNP-bound in GDN	Pseudomonas stutzeri ATCC 14405 = CCUG 16156	3.7	ELECTRON MICROSCOPY	99.8
7O16	MEMBRANE PROTEIN	03/28/21	ABC transporter NosDFY, nucleotide-free in lipid nanodisc, R-domain 3	Pseudomonas stutzeri ATCC 14405 = CCUG 16156	0	ELECTRON MICROSCOPY	99.8
7OSJ	MEMBRANE PROTEIN	06/08/21	ABC Transporter complex NosDFYL, membrane anchor	Pseudomonas stutzeri ATCC 14405 = CCUG 16156	3.8	ELECTRON MICROSCOPY	99.8
7OSG	MEMBRANE PROTEIN	06/08/21	ABC Transporter complex NosDFYL, consensus refinement	Pseudomonas stutzeri ATCC 14405 = CCUG 16156	3.3	ELECTRON MICROSCOPY	99.8
7OSI	MEMBRANE PROTEIN	06/08/21	ABC Transporter complex NosDFYL, R-domain 3	Pseudomonas stutzeri ATCC 14405 = CCUG 16156	3.8	ELECTRON MICROSCOPY	99.8
7OSH	MEMBRANE PROTEIN	06/08/21	ABC Transporter complex NosDFYL, R-domain 2	Pseudomonas stutzeri ATCC 14405 = CCUG 16156	3.8	ELECTRON MICROSCOPY	99.8
7O14	MEMBRANE PROTEIN	03/28/21	ABC transporter NosDFY, nucleotide-free in lipid nanodisc, R-domain 1	Pseudomonas stutzeri ATCC 14405 = CCUG 16156	0	ELECTRON MICROSCOPY	99.8
7OSF	MEMBRANE PROTEIN	06/08/21	ABC Transporter complex NosDFYL, R-domain 1	Pseudomonas stutzeri ATCC 14405 = CCUG 16156	3.8	ELECTRON MICROSCOPY	99.8
7ZNQ	MEMBRANE PROTEIN	04/21/22	ABC transporter complex NosDFYL in GDN	Pseudomonas stutzeri ATCC 14405 = CCUG 16156	3.04	ELECTRON MICROSCOPY	99.8
7O10	MEMBRANE PROTEIN	03/28/21	ABC transporter NosDFY, nucleotide-free in GDN, R-domain 2	Pseudomonas stutzeri ATCC 14405 = CCUG 16156	3.6	ELECTRON MICROSCOPY	99.8
7O15	MEMBRANE PROTEIN	03/28/21	ABC transporter NosDFY, nucleotide-free in lipid nanodisc, R-domain 2	Pseudomonas stutzeri ATCC 14405 = CCUG 16156	0	ELECTRON MICROSCOPY	99.8
7O17	MEMBRANE PROTEIN	03/28/21	ABC transporter NosDFY E154Q, ATP-bound in lipid nanodisc	Pseudomonas stutzeri; Pseudomonas stutzeri ATCC 14405 = CCUG 16156	4.5	ELECTRON MICROSCOPY	99.8
7O0Y	MEMBRANE PROTEIN	03/28/21	ABC transporter NosDFY, nucleotide-free in GDN	Pseudomonas stutzeri ATCC 14405 = CCUG 16156	3.3	ELECTRON MICROSCOPY	99.8
7O13	MEMBRANE PROTEIN	03/28/21	ABC transporter NosDFY, nucleotide-free in lipid nanodisc	Pseudomonas stutzeri ATCC 14405 = CCUG 16156	3.6	ELECTRON MICROSCOPY	99.8
7O11	MEMBRANE PROTEIN	03/28/21	ABC transporter NosDFY, nucleotide-free in GDN, R-domain 1	Pseudomonas stutzeri ATCC 14405 = CCUG 16156	3.7	ELECTRON MICROSCOPY	99.8
7QBA	MEMBRANE PROTEIN	11/18/21	CryoEM structure of the ABC transporter NosDFY complexed with nitrous oxide reductase NosZ	Pseudomonas stutzeri	3.78	ELECTRON MICROSCOPY	99.8

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 138 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002235 (353 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSTAB_3521 Search term: nosD Search term: NosD protein

Human Homologs

References