Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_3642

Gene Feature Overview

Strain	Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1 GCF_000219605.1|latest
Locus Tag	PSTAB_3642
Name
Replicon	chromosome
Genomic location	3923963 - 3925312 (- strand)

Cross-References

RefSeq	YP_004716012.1
GI	339495719
Entrez	10944685
INSDC	AEJ06923.1
NCBI Locus Tag	PSTAB_3642
UniParc	UPI0002047845
UniProtKB Acc	F8H1Q6
UniProtKB ID	F8H1Q6_PSEUT
UniRef100	UniRef100_F2N1A4
UniRef50	UniRef50_P37773
UniRef90	UniRef90_A0A098G0L0

Product

Feature Type	CDS
Coding Frame	1
Product Name	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
Synonyms
Evidence for Translation
Charge (pH 7)	-7.75
Kyte-Doolittle Hydrophobicity Value	0.049
Molecular Weight (kDa)	47.9
Isoelectric Point (pI)	6.23

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 578 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001663 (497 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSTAB_3642 Search term: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase

Human Homologs

References