Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_3854 (rarD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1
GCF_000219605.1|latest
Locus Tag
PSTAB_3854
Name
rarD
Replicon chromosome
Genomic location 4159087 - 4159977 (+ strand)

Cross-References

RefSeq YP_004716224.1
GI 339495931
Entrez 10944897
INSDC AEJ07135.1
NCBI Locus Tag PSTAB_3854
UniParc UPI000215D5C1
UniProtKB Acc F8H400
UniProtKB ID F8H400_PSEUT
UniRef100 UniRef100_F8H400
UniRef50 UniRef50_A4VRB8
UniRef90 UniRef90_A4VRB8

Product

Feature Type CDS
Coding Frame 1
Product Name
RarD protein
Synonyms
Evidence for Translation
Charge (pH 7) 6.91
Kyte-Doolittle Hydrophobicity Value 0.793
Molecular Weight (kDa) 33073.1
Isoelectric Point (pI) 9.86

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 239 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000474 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAB_3854
Search term: rarD
Search term: RarD protein

Human Homologs

References

No references are associated with this feature.