Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_3898
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1
GCF_000219605.1|latest |
| Locus Tag |
PSTAB_3898
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4204850 - 4206667 (+ strand) |
Cross-References
| RefSeq | YP_004716268.1 |
| GI | 339495975 |
| Entrez | 10944941 |
| NCBI Locus Tag | PSTAB_3898 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
DEAD-box ATP dependent DNA helicase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 27.34 |
| Kyte-Doolittle Hydrophobicity Value | -0.637 |
| Molecular Weight (kDa) | 66151.8 |
| Isoelectric Point (pI) | 10.63 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 637 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000419 (525 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSTAB_3898
Search term: DEAD-box ATP dependent DNA helicase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 27 [Source:HGNC Symbol;Acc:HGNC:15837]
E-value:
4.3e-66
Percent Identity:
43.9
|
References
No references are associated with this feature.