Pseudomonas stutzeri DSM 4166, PSTAA_0884
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas stutzeri DSM 4166
GCF_000195105.1|latest |
| Locus Tag |
PSTAA_0884
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 958871 - 960565 (- strand) |
Cross-References
| RefSeq | YP_005937536.1 |
| GI | 386019512 |
| Entrez | 12528026 |
| NCBI Locus Tag | PSTAA_0884 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative ABC transporter ATP-binding protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -12.37 |
| Kyte-Doolittle Hydrophobicity Value | -0.418 |
| Molecular Weight (kDa) | 62382.0 |
| Isoelectric Point (pI) | 5.27 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004253 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSTAA_0884
Search term: putative ABC transporter ATP-binding protein
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ABCF2-H2BK1 readthrough [Source:HGNC Symbol;Acc:HGNC:54751]
E-value:
4.3e-44
Percent Identity:
29.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily F member 2 [Source:HGNC Symbol;Acc:HGNC:71]
E-value:
4.3e-44
Percent Identity:
29.4
|
References
No references are associated with this feature.