Pseudomonas stutzeri DSM 4166, PSTAA_3966

Gene Feature Overview

Strain	Pseudomonas stutzeri DSM 4166 GCF_000195105.1|latest
Locus Tag	PSTAA_3966
Name
Replicon	chromosome
Genomic location	4253952 - 4255469 (- strand)

Cross-References

RefSeq	YP_005940563.1
GI	386022538
Entrez	12531118
INSDC	AEA85821.1
NCBI Locus Tag	PSTAA_3966
UniParc	UPI0002046FDE
UniProtKB Acc	F2N4S0
UniProtKB ID	F2N4S0_PSEU6
UniRef100	UniRef100_F2N4S0
UniRef50	UniRef50_P21685
UniRef90	UniRef90_A0A098FYP8

Product

Feature Type	CDS
Coding Frame	1
Product Name	phytoene desaturase
Synonyms
Evidence for Translation
Charge (pH 7)	0.22
Kyte-Doolittle Hydrophobicity Value	-0.222
Molecular Weight (kDa)	56169.4
Isoelectric Point (pI)	7.03

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 311 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG016700 (72 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSTAA_3966 Search term: phytoene desaturase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000517901 retinol saturase [Source:HGNC Symbol;Acc:HGNC:25991] E-value: 3.7e-10 Percent Identity: 23.1
Ensembl 110, assembly GRCh38.p14	ENSP00000295802 retinol saturase [Source:HGNC Symbol;Acc:HGNC:25991] E-value: 3.7e-10 Percent Identity: 23.1

References