Pseudomonas stutzeri DSM 4166, PSTAA_4031 (dbpA)

Gene Feature Overview

Strain	Pseudomonas stutzeri DSM 4166 GCF_000195105.1|latest
Locus Tag	PSTAA_4031
Name	dbpA
Replicon	chromosome
Genomic location	4329665 - 4331047 (+ strand)

Cross-References

RefSeq	YP_005940628.1
GI	386022603
Entrez	12531183
INSDC	AEA85886.1
NCBI Locus Tag	PSTAA_4031
UniParc	UPI0002047162
UniProtKB Acc	F2N5L9
UniProtKB ID	F2N5L9_PSEU6
UniRef100	UniRef100_F2N5L9
UniRef50	UniRef50_P21693
UniRef90	UniRef90_L0GHR7

Product

Feature Type	CDS
Coding Frame	1
Product Name	ATP-dependent RNA helicase DbpA
Synonyms
Evidence for Translation
Charge (pH 7)	4.96
Kyte-Doolittle Hydrophobicity Value	-0.002
Molecular Weight (kDa)	49.5
Isoelectric Point (pI)	8.29

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 618 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000446 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSTAA_4031 Search term: dbpA Search term: ATP-dependent RNA helicase DbpA

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000464050 DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676] E-value: 1.3e-57 Percent Identity: 38.4
Ensembl 110, assembly GRCh38.p14	ENSP00000374574 DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676] E-value: 1.3e-57 Percent Identity: 38.4
Ensembl 110, assembly GRCh38.p14	ENSP00000352308 DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676] E-value: 1.3e-57 Percent Identity: 38.4
Ensembl 110, assembly GRCh38.p14	ENSP00000463561 DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676] E-value: 1.3e-57 Percent Identity: 38.4

References